Research ID:http://www.researcherid.com/rid/K-3172-2012

Google Scholar:http://scholar.google.com/citations?user=tAjBf68AAAAJ&hl=en

教育背景

工作经历

研究兴趣

古菌生物学、海洋微生物学、微生物生态学、合成微生物组学

科研项目

1.国家杰出青年科学基金，古菌生物学，32225003，2023-2027，主持，在研。

2.国家重点研发计划课题：抗噬菌体模块的挖掘及机制解析，2023-2027，主持，在研。

3.国家自然科学基金委重大研究计划集成项目，典型海陆交汇关键带微生物驱动碳氮硫循环的机制与碳源汇效应，9225130，2023-2024，子课题，在研。

4.国家自然科学基金面上项目，31970105，红树林湿地沉积物中深古菌（Bathyarchaeota）重要亚群对不同碳源的响应和代谢机制研究，2020-2023，主持，在研。

5.广东省普通高校创新团队项目（项目牵头人），海洋微生物组及其应用，2020KCXTD023，2021-2023，主持，在研。

6.深圳市科技创新委员会基础研究重点项目，JCYJ20200109105010363，城市污染水体中卤代芳香烃微生物降解脱毒关键模块的挖掘与应用潜力评估，2020-2022，主持，在研。

7.国家自然科学基金委重大研究计划培育项目，91851105，近海沉积物中阿斯加德（Asgard）古菌的碳代谢机制及其生态效应研究，2019-2021，主持，结题。

8.广东省教育厅-基础研究重大项目及应用研究重大项目，2017KZDXM071，红树林湿地深古菌的碳代谢分子机制研究，2018-2020，主持，结题。

9.深圳市科技创新委员会基础研究项目，JCYJ20170818091727570，红树林湿地深古菌的碳代谢多样性及其分子生物学机制研究，2018-2020，主持，结题。

10.国家自然科学基金优秀青年科学项目，31622002，古菌微生物生态学，2017.01-2019.12，主持，结题。

11.国家重大人才工程项目（青年），元素生物地球化学循环的微生物驱动机制，主持，结题。

12.国家自然科学基金青年基金项目，41506163，红树林湿地生态系统中MCG古菌多样性和丰度的时空变化规律及其环境效应研究，2016.01-2018.12，主持，结题。

13.广东省自然科学基金博士启动项目，2014A030310056，MCG古菌在滨海红树林湿地的种群结构、功能及其生态效应研究，2015.01-2018.01，主持，结题。

14.深圳市海外高层次人才创新创业（孔雀技术创新）项目，KQCX2015032416053646，无机活性氮超负荷下的深圳湾微生物氮循环的生态机制及环境效应，2015.9-2017.9，主持，结题。

所获代表性奖励

2022.01 2021年度中国十大海洋科技进展（排名第一）

2022.01中国海洋与湖沼学会2021年十大科技进展（（排名第一）

2020.11第六届中国生态学学会青年科技奖

2020.06 2019年中国海洋工程科学技术奖一等奖（排名第七）

2016.03国家海外高层人才计划青年人才

学术兼职

国际微生物生态学会青年大使（2015年至今)

中国微生物学会环境微生物专业委员会委员（2016年－至今)

中国微生物学会地质微生物专业委员会委员（2017年－至今)

中国海洋湖沼学会底栖生物学分会委员（2022年－至今）

副主编(Associate Editor):

1.Microbiome(2022－至今)

2.Marine Pollution Bulletin(2022－至今)

3.Environmental Microbiome(2022－至今)

4.Frontiers in Microbiology(Biology of Archaea)(2019－至今)

编委(Editorial Board Members)：

1.Applied and Environmental Microbiology(2020-2025)

2.mLife(2021-2023)

3.iMeta(2022－至今)

4.Microorganisms(2022-2023)

5.《生物工程学报》（2017.11-2022.10）

6.《微生物学报》（2021.10-2026.10）

代表性论文  ( *Corresponding Author;^#equal contribution;lab members;⁺visitingstudents or researchers )

1.Yang Tong^#, Xinying Wu^#,Yang Liu^#, Huiyu Chen,Yan Zhou ,Li Jiang , Meng Li*, Suwen Zhao*,Yan Zhang* (2023) Alternative Z-genome biosynthesis pathway shows evolutionary progression from archaea to phage. Nature Microbiology  https://www.nature.com/articles/s41564-023-01410-1.

2.Cui-Jing Zhang^#, Yu-Rong Liu^#, Gui-Hong Cha,Yang Liu, Xin-Quan Zhou,Zhong-Yi Lu,Jie Pan,Ming-Wei Cai, Meng Li* (2023) Potential for mercury methylation by Asgard archaea in mangrove sediments. The ISME Journal 17:478-485. https://doi.org/10.1038/s41396-023-01360-w.

3.Jinjie Zhou, Jessica A. Smith, Meng Li* , Dawn E. Holmes (2023) Methane production byMethanothrix thermoacetophilavia direct interspecies electron transfer withGeobacter metallireducens. mBio  https://journals.asm.org/doi/10.1128/mbio.00360-23.

4.Zhao Ma, Yuanbo Li*, Chao Lu, Meng Li*  (2023) On-site Screening Method for Bioavailability Assessment of the Organophosphorus Pesticide, Methyl Parathion, and Its Primary Metabolite in Soils by Paper Strip Biosensor. Journal of Hazardous Materials . https://doi.org/10.1016/j.jhazmat.2023.131725.

5.Xinxu Zhang,Cuijing Zhang,Yang Liu, Rui Zhang, Meng Li*  (2023) Non-negligible roles of archaea in coastal carbon biogeochemical cycling. Trends in Microbiology 31(6):586-600

6.Zhichao Zhou^#,Yang Liu^#, Karthik Anantharaman, Meng Li*  (2022) The expanding Asgard archaea invoke novel insights into Tree of Life and eukaryogenesis. mLife  https://doi.org/10.1002/mlf2.12048.

7.Huan Du,Jie Pan,Dayu Zou,Yuhan Huang,Yang Liu*, Meng Li*  (2022) Active functional modules derived from network analysis and metabolic interactions reveal the functions of microbiome. Microbiome 10, 224 (2022). https://doi.org/10.1186/s40168-022-01421-w.

8.Xinxu Zhang,Yuhan Huang,Yang Liu, Wei Xu,Jie Pan, Xiaowei Zheng,Huan Du,Cuijing Zhang,Zhongyi Lu,Dayu Zou,Zongbao Liu,Mingwei Cai,Jinbo Xiong, Yaxin Zhu, Zhiyang Dong, Hongchen Jiang, Juquan Jiang, Hailiang Dong, Zhuhua Luo, Li Huang, Meng Li*  (2022) An ancient respiratory system in the widespread sedimentary archaeaThermoprofundales. Molecular Biology and Evolution 39(10): msac213 https://doi.org/10.1093/molbev/msac213.

9.Jie Pan^#, Wei Xu^#,Zhichao Zhou, Zhuhua Luo*, Meng Li* (2022) Metagenomic resolution of diverse microbial community and taxonomically redundant metabolisms in deep-sea hydrothermal sediments from Mid-Atlantic Ridge. Microbiome 8: 10 https://doi.org/10.1186/s40168-021-01202-x.

10.Xinxu Zhang^#,Zongbao Liu^#, Wei Xu,Jie Pan,Mingwei Cai, Zhuhua Luo, Meng Li*  (2022) Genomic insights into versatile lifestyle of three new bacterial candidate phyla. SCIENCE CHINA Life Sciences 64, https://doi.org/10.1007/s11427-021-2037-x.

11.Zhuo Zhou^#,Cui-jing Zhang^#, Peng-fei Liu^#, Lin Fu^#, Rafael Laso-Pérez, Lu Yang, Li-Ping Bai, Jun-zhang Lin, Wei-dong Wang, Gunter Wegener*, Meng Li* , Lei Cheng* (2021) Non-syntrophic methanogenic hydrocarbon degradation by an archaeal species. Nature 601: 257-262. https://www.nature.com/articles/s41586-021-04235-2.

12.Mingwei Cai,Changhai Duan,Xinxu Zhang,Jie Pan,Yang Liu,Cuijing Zhang, Meng Li* (2021) Genomic and transcriptomic dissection of Theionarchaea in marine ecosystem. SCIENCE CHINA Life Sciences 64, https://doi.org/10.1007/s11427-021-1996-x.

13.Wen-Cong Huang^#,Yang Liu^#,Xinxu Zhang,Cui-Jing Zhang,Dayu Zou, Shiling Zheng, Wei Xu⁺, Zhu-Hua Luo, Fanghua Liu, Meng Li* (2021) Comparative genomic analysis reveals metabolic flexibility of Woesearchaeota. Nature Communications 12:5281.

14.Zhi-Feng Zhang,Yue-Ping Pan,Yue Liu, Meng Li*  (2021) High-level diversity of basal fungal lineages and the control of fungal community assembly by stochastic processes in mangrove sediments. Applied and Environmental Microbiology 87: e00928-21. https://doi.org/10.1128/AEM.00928-21.

15.Zhi-Feng Zhang,Yue-Ping Pan,Jie Pan, Meng Li ^*(2021) Biogeography, assembly patterns, driving factors and interactions of archaeal community assembly in mangrove sediments mSystems 6: e01381-20. https://doi.org/10.1128/mSystems.01381-20.

16.Yang Liu^#,Kira S. Makarova^#,Wen-Cong Huang^#, Yuri I. Wolf, Anastasia Nikolskaya,Xinxu Zhang,Mingwei Cai,Cui-Jing Zhang, Wei Xu, Zhuhua Luo, Lei Cheng, Eugene V. Koonin*, Meng Li*  (2021) Expended diversity of Asgard archaea and their relationships with eukaryotes. Nature 593: 553-557 https://www.nature.com/articles/s41586-021-03494-3.

17.Rong Xiang, Meng Li*  (2021) Identification of Tn6835 and a Novel Genomic Island MMGI-1 in a Pan-ResistantMorganella MorganiiStrain. Antimicrobial Agents and Chemotherapy  https://doi.org/10.1128/AAC.02524-20

18.Xiuran Yin^#,Mingwei Cai^#,Yang Liu, Guowei Zhou, Tim Richter-Heitmann1, David A. Aromokeye, Ajinkya Kulkarni, Rolf Nimzyk,Zhichao Zhou,Jie Pan, Yuchun Yang+, Ji-Dong Gu, Marcus Elvert, Meng L i*, Michael W. Friedrich* (2021)Subgroup level differences of physiological activities in marine Lokiarchaeota. The ISME Journal 15(6): 848-861. https://doi.org/10.1038/s41396-020-00818-5.

19.Yuchun Yang⁺, Craig W. Herbold, Man-Young Jung, Wei Qin,Mingwei Cai,Huan Du, Jih-Gaw Lin, Xiao-yan Li, Meng Li* , Ji-Dong Gu* (2021) Survival strategies of ammonia-oxidizing archaea (AOA) in a full-scale WWTP treating mixed landfill leachate containing copper ions and operating at low-intensity of aeration. Water Research 191: 116798. https://doi.org/10.1016/j.watres.2020.116798.

20.Wenzhe Hu^#,Jie Pan^#, Bin Wang, Jun Guo, Meng Li ^*, Meiying Xu^*(2021) Metagenomic insights into the metabolism and evolution of a new Thermoplasmata order (CandidatusGimiplasmatales). Environmental Microbiology 23(7): 3695-3709 https://doi.org/10.1111/1462-2920.15349

21.Zhichao Zhou,Yang Liu, Jie Pan, Karthik Anantharaman, John A Breier, Gregory J Dick, Meng Li* (2020) Gammaproteobacteria mediating methyl-, sulfur- and petroleum organic compound utilizations in deep ocean hydrothermal plume. The ISME Journal 14: 3136-3148. https://doi.org/10.1038/s41396-020-00745-5.

22.Dayu Zou, Ru Wan, Hongbin Liu, Shuh-Ji Kao*, Meng Li* (2020) Genomic characteristics of a novel ammonia-oxidizing archaea in the Jiulong River estuary. Applied and Environmental Microbiology 86: e00736-20. https://doi .org/10.1128/AEM.00736-20.

23.Cui-Jing Zhang,Jie Pan,Yang Liu,Chang-Hai Duan, Meng Li*  (2020)Genomic and transcriptomic insights into methanogenesis potential of novel methanogens from mangrove sediments. Microbiome 8, 94. https://doi.org/10.1186/s40168-020-00876-z

24. Zhongyi Lu^#,Ting Fu^#, Tianyi Li,Yang Liu,Siyu Zhang,Jinquan Li, Junbiao Dai, Eugene V Koonin, Guohui Li, Huiying Chu*, Meng Li*  (2020) Co-evolution of Eukaryotic-like Vps4 and ESCRT-III Subunits in the Asgard Archaea mBio 11: e00417-20. https://mbio.asm.org/content/11/3/e00417-20.

25.Jie Pan,Zhichao Zhou, Oded Beja,Mingwei Cai, Yuchun Yang+,Yang Liu, Ji-Dong Gu, Meng Li* (2020) Geneomic and transcriptomic evidence of metabolisms for light sensing, porphyrin biosynthesis, Calvin-Benson-Bassham cycle, and urea production in Bathyarchaeota from mangrove sediments. Microbiome 8:34(2020) https://doi.org/10.1186/s40168-020-00820-1

26.Mingwei Cai^#,Yang Liu^#, Xiuran Yin,Zhichao Zhou, Michael W. Friedrich, Tim Richter-Heitmann, Rolf Nimzyk, Ajinkya Kulkarni, Xiaowen Wang, Wenjin Li,Jie Pan, Yuchun Yang+, Ji-Dong Gu, Meng Li* (2020) Diverse Asgard archaea including the novel phylum Gerdarchaeota participate in organic matter degradation. SCIENCE CHINA Life Sciences 63(6):886-897. https://doi.org/10.1007/s11427-020-1679-1.

27.Yuchun Yang⁺, Holger Daims,Yang Liu, Craig Herbold, Petra Pjevac, Jih-Gaw Lin, Meng Li* , Ji-Dong Gu* (2020) Activity and metabolic versatility of complete ammonia oxidizers in full-scale wastewater treatment systems. mBio 11: e03175-19. https://doi.org/10.1128/mBio.03175-19.

28.Zhichao Zhou,Yang Liu, Wei Xu,Jie Pan, Zhu-Hua Luo*, Meng Li* (2020) Genome- and community-level interaction insights into carbon utilization and element cycling functions of Hydrothermarchaeota in hydrothermal sediment. mSystems 5:e00795-19. https://doi.org/10.1128/mSystems.00795-19.

29.Yuchun Yang+,Jie Pan,Zhichao Zhou, Jiapeng Wu,Yang Liu, Jih-Gaw Lin, Yiguo Hong, Xiaoyan Li, Meng Li* , Ji-Dong Gu* (2020) Complex microbial nitrogen-cycling networks in three distinct anammox-inoculated wastewater treatment systems. Water Research 168: 115142. https://doi.org/10.1016/j.watres.2019.115142.

30.Yongming Wang,Jie Pan, Jun Yang,Yueping Pan,Zhichao Zhou, Meng Li*  (2020) Patterns and processes of free-living and particle-associated bacterioplankton and archaeaplankton communities in a subtropical river-bay system in South China. Limnology and Oceanography 65(S1): S161-S179.

31.Cui-Jing Zhang,Jie Pan,Chang-Hai Duan,Yong-Ming Wang,Yang Liu, Jian Sun, Hai-Chao Zhou, Xin Song, Meng Li*  (2019) Prokaryotic diversity in mangrove sediments across southeastern China fundamentally differs from that in other biomes. mSystems 4:e00442-19. https://doi.org/10.1128/mSystems.00442-19.

32.Zongbao Liu, Uli Klümper,Yang Liu, Yuchun Yang+, Jih-Gaw Lin, Ji-Dong Gu, Meng Li* (2019) Metagenomic and metatranscriptomic analyses reveal activity and hosts of antibiotic resistance genes in activated sludge. Environment International 129:208-220doi.org/10.1016/j.envint.2019.05.036.

33. Dayu Zou, Yingdong Li, Hongbin Liu*, Meng Li*  (2019) Genomic adaptation to eutrophication of ammonia-oxidizing Archaea in the Pearl River estuary. Environmental Microbiology 21(7): 2320-2332DOI: 10.1111/1462-2920.14613

34.Zhi-Chao Zhou,Yang Liu, Karen G Lloyd,Jie Pan, Yuchun Yang⁺, Ji-Dong Gu*, Meng Li* (2019) Genomic and transcriptomic insights into the ecology and metabolism of benthic archaeal cosmopolitan, Thermoprofundales (MBG-D archaea) The ISME Journal  13 (4): 885-901. https://doi.org/10.1038/s41396-018-0321-8.

35.Xiaobo Liu, Meng Li* , Cindy J. Castelle, Alexander J. Probst,Zhichao Zhou,Jie Pan,Yang Liu, Jillian F. Banfield, Ji-Dong Gu* (2018) Insights into the ecology, evolution and metabolism of the widespread Woesearchaeotal lineages. Microbiome 6(1): 102. https://doi.org/10.1186/s40168-018-0488-2.

36.Zhi-Chao Zhou,Jie Pan, Fengping Wang, Ji-Dong Gu, Meng Li*  (2018) Bathyarchaeota: globally distributed metabolic generalists in anoxic environments FEMS Microbiology Reviews 42(5): 639-655. https://doi.org/10.1093/femsre/fuy023

37.Yang Liu,Zhi-Chao Zhou,Jie Pan, Brett Baker, Ji-Dong Gu, Meng Li*  (2018) Comparative genomic inference suggests mixotrophic lifestyle for Thorarchaeota. The ISME Journal 12:1021-1031. https://doi.org/10.1038/s41396-018-0060-x.

38.Ying He^#, Meng Li ^#, Vengatesha Perumal, Xiaoyuan Feng, Juanjuan Xie, Jing Fang, Stefan Sievert, Fengping Wang* (2016) Genomic and Enzymatic evidence for acetogenesis among multiple lineages of the archaeal phylum Bathyarchaeota widespread in marine sediments. Nature Microbiology 1：16035. https://doi.org/10.1038/nmicrobiol.2016.35.

39. Meng Li* , Brett J. Baker, Karthik Anantharaman, Sunit Jain, John A. Breier, Gregory J. Dick* (2015) Genomic and Transcriptomic Evidence for Scavenging of Diverse Organic Compounds by Widespread Deep-Sea Archaea. Nature Communications 6: 8933 https://doi.org/10.1038/ncomms9933.

40. Meng Li , Brandy M. Toner, Brett J. Baker, John A. Breier, Cody S. Sheik, Gregory J. Dick* (2014) Microbial iron uptake as a mechanism for dispersing iron from deep-sea hydrothermal vents. Nature Communications 5: 3192. https://doi.org/10.1038/ncomms4192.